MF0001 arabinoxylan degradation cpd [arabinoxylan] [arabinose, xylose] K01209 K15921 K01181 K01198 K15531 K18205 pos input hier carbohydrate degradation polysaccharide degradation ref PMID:24239877 /// MF0002 fructan degradation cpd [fructan] [fructose] K03332 K01193 pos input hier carbohydrate degradation polysaccharide degradation ref MetaCyc Pathway: fructan degradation /// MF0003 pectin degradation I cpd [pectin] [methanol, galacturonate] K01051 K01184,K01213 K18650 pos input hier carbohydrate degradation polysaccharide degradation ref MetaCyc Pathway: pectin degradation III Kegg M00081 /// MF0004 pectine degradation II cpd [pectine] [galacturonate, glyceraldehyde 3-phosphate, pyruvate, methanol] K01051 K18650 K01728 K19551 K01731 K01730 K01815 K00874 K01625 K17463 pos input hier carbohydrate degradation polysaccharide degradation ref MetaCyc Pathway: pectin degradation II MetaCyc Pathway: 4-deoxy-L-threo-hex-4-enopyranuronate degradation Kegg Pathway Pentose and glucuronate interconversions /// MF0005 starch degradation cpd [starch, glycogen] [glucose] cpd [starch, glycogen] [glucose, glucose 1-phosphate] K01176 K07405 K05343 K01200 K01208 K00688 K16153 K00705 K01187 K15922 K01178 K01182 pos input hier carbohydrate degradation polysaccharide degradation ref Kegg Pathway Starch and sucrose metabolism /// MF0006 lactose degradation cpd [lactose] [galactose, glucose] K12111 K01190 K12308 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: lactose degradation II /// MF0007 lactose and galactose degradation cpd [lactose] [glucose, glyceraldehyde 3-phosphate] K02786,K02787,K02788 K01220 K01819 K00917 K08302 K01635 pos input hier carbohydrate degradation disaccharide degradation ref PMID:11976750 Kegg M00281 /// MF0008 maltose degradation cpd [maltose] [glucose, glucose 6-phosphate] K00691 K01838 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: maltose degradation /// MF0009 melibiose degradation cpd [melibiose] [galactose, glucose] K07406 K07407 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: melibiose degradation /// MF0010 sucrose degradation I cpd [sucrose] [fructose 6-phosphate, glucose 6-phosphate] K01193 K00847 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: sucrose degradation I (sucrose phosphotransferase) /// MF0011 sucrose degradation II cpd [sucrose] [fructose 6-phosphate] K00690 K00847 K01792 K01835 K15778,K15779 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: sucrose degradation IV (sucrose phosphorylase) /// MF0012 trehalose degradation cpd [trehalose] [glucose] K03731 K01226 K01194 K05342 pos input hier carbohydrate degradation disaccharide degradation ref MetaCyc Pathway: trehalose degradation I (low osmolarity) MetaCyc Pathway: trehalose degradation II (trehalase) MetaCyc Pathway: trehalose degradation III MetaCyc Pathway: trehalose degradation IV MetaCyc Pathway: trehalose degradation VIriplasmic) /// MF0013 allose degradation cpd [allose] [fructose 6-phosphate] K00881 K01807,K01808 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: D-allose degradation /// MF0014 arabinose degradation cpd [arabinose] [ribulose 5-phosphate] K01804 K00853 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: L-arabinose degradation I /// MF0015 fructose degradation cpd [fructose 1-phosphate] [fructose 1,6-bisphosphate] K00882 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: fructose degradation /// MF0016 fucose degradation cpd [fucose] [lactaldehyde, glyceraldehyde 3-phosphate] K02431 K01818 K00879 K01628 K01803 pos output hier organic acid metabolism propionate metabolism ref MetaCyc Pathway: fucose degradation /// MF0017 galactose degradation cpd [galactose] [glucose 6-phosphate] K01785 K00849 K00965 K01784 K17716 K01838 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: D-galactose degradation I (Leloir pathway) /// MF0018 mannose degradation cpd [mannose 6-phosphate] [fructose 6-phosphate] K01809 K15916 K16011 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: D-mannose degradation /// MF0019 rhamnose degradation cpd [rhamnose] [lactaldehyde, glyceraldehyde 3-phosphate] K03534 K01813 K01820 K00848 K01629 K01803 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: L-rhamnose degradation I /// MF0020 ribose degradation cpd [ribose] [ribose 5-phosphate] K06726 K00852 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: ribose degradation /// MF0021 xylose degradation cpd [xylose] [xylulose 5-phosphate] K01805 K00854 pos input hier carbohydrate degradation monosaccharide degradation ref MetaCyc Pathway: xylose degradation I /// MF0022 galacturonate degradation I cpd [galacturonate] [glyceraldehyde 3-phosphate, pyruvate] K01812 K00041 K01685 K16849,K16850 K00874 K17463 K01625 K11395 pos input hier carbohydrate degradation sugar acid degradation ref MetaCyc Pathway: D-galacturonate degradation I /// MF0023 galacturonate degradation II cpd [galacturonate] [CO2, 2-oxoglutarate] K18981 K01707 K13877 K19588 pos input hier carbohydrate degradation sugar acid degradation ref MetaCyc Pathway: D-galacturonate degradation II /// MF0024 phenylalanine degradation cpd [phenylalanine, 2-oxoglutarate] [CO2, phenylacetate, glutamate] K00832 K00812 K00813 K11358 K00817 K04103 K00146 K00129 pos input hier amino acid degradation aromatic amino acid degradation ref MetaCyc Pathway: L-phenylalanine degradation II (anaerobic) Kegg Pathway Phenylalanine metabolism /// MF0025 tryptophan degradation cpd [tryptophan] [indole, NH3, pyruvate] K01667 pos input hier amino acid degradation aromatic amino acid degradation ref Metacyc Pathway: tryptophan degradation II /// MF0026 tyrosine degradation I cpd [tyrosine, 2-oxoglutarate, pyruvate] [CO2, 4-hydroxyphenylacetate, 4-hydroxyphenylethanol, glutamate, alanine] K00832 K00812 K00813 K11358 K00817 K00129 K00055 pos input hier amino acid degradation aromatic amino acid degradation ref Kegg Pathway Tyrosine metabolism /// MF0027 tyrosine degradation II cpd [tyrosine] [phenol, pyruvate, NH3] K01668 pos input hier amino acid degradation aromatic amino acid degradation ref Kegg Pathway Tyrosine metabolism /// MF0028 aspartate degradation I cpd [aspartate, 2-oxoglutarate] [glutamate, oxaloacetate] K00812 K00813 K11358 pos input hier amino acid degradation negatively charged amino acid degradation ref Metacyc Pathway: aspartate degradation I /// MF0029 aspartate degradation II cpd [aspartate] [NH3, fumarate] K01744 pos input hier amino acid degradation negatively charged amino acid degradation ref Metacyc Pathway: glutamate degradation II /// MF0030 glutamate degradation I cpd [glutamate, acetyl-CoA] [NH3, CO2, crotonyl-CoA, acetate] K00260 K15371 K00261 K00109 K01039,K01040 K01615 pos input hier amino acid degradation negatively charged amino acid degradation ref MetaCyc Pathway: L-glutamate degradation I MetaCyc Pathway: L-glutamate degradation V (via hydroxyglutarate) /// MF0031 glutamate degradation II cpd [glutamate] [CO2, 4-aminobutanoate] K01580 pos input hier amino acid degradation negatively charged amino acid degradation ref MetaCyc Pathway: L-glutamate degradation IV /// MF0032 glutamate degradation III cpd [glutamate] [NH3, pyruvate, acetate] K01846,K19268 K04835 pos input hier amino acid degradation negatively charged amino acid degradation ref MetaCyc Pathway: L-glutamate degradation VI (to pyruvate) /// MF0033 alanine degradation I cpd [alanine] [NH3, pyruvate] K01775 K00285 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref Metacyc Pathway: alanine degradation I /// MF0034 alanine degradation II cpd [2-oxoglutarate, alanine] [glutamate, pyruvate] cpd [alanine] [pyruvate, NH3] K00814 K00259 K19244 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref Metacyc Pathway: alanine degradation II Metacyc Pathway: alanine degradation IV /// MF0035 glycine degradation cpd [glycine, tetrahydrofolate] [CO2, NH3, 5,10-methylenetetrahydrofolate] K00281 K00282,K00283 K00605 K00382 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: glycine cleavage /// MF0036 isoleucine degradation cpd [isoleucine, 2-oxoglutarate] [glutamate, CO2, propanoyl-CoA, acetyl-CoA] K00826 K00166,K00167,K09699,K00382 K11381,K09699,K00382 K00248 K00249 K09478 K11410 K01692 K01782 K01825 K01782 K01825 K07547,K07548 K12405 K15016 K00626 K00632 K07508 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref Metacyc Pathway: isoleucine degradation I Kegg Pathway Valine, leucine and isoleucine degradation - Reference pathway /// MF0037 leucine degradation cpd [leucine, 2-oxoglutarate] [glutamate, acetoacetate, CO2, acetyl-CoA] K00826 K00166,K00167,K09699,K00382 K11381,K09699,K00382 K00249 K00253 K01968,K01969 K13766 K01640 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: L-leucine degradation I Kegg M00036 Kegg Pathway Valine, leucine and isoleucine degradation - Reference pathway /// MF0038 methionine degradation I cpd [methionine] [homocysteine] K00789 K00558 K19398 K17399 K01251 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: L-methionine degradation I (to L-homocysteine) Kegg M00035 /// MF0039 methionine degradation II cpd [methionine] [methanethiol, 2-oxobutanoate, NH3] K01761 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: L-methionine degradation II /// MF0040 proline degradation cpd [proline] [glutamate] K00318,K00294 K13821 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: proline degradation /// MF0041 valine degradation cpd [valine, 2-oxoglutarate] [propanoyl-CoA, glutamate, 3-amino-isobutanoate, CO2] K00826 K00166,K00167,K09699,K00382 K11381,K09699,K00382 K00249 K00248 K09478 K11410 K01692 K01715 K01782 K01825 K13767 K15016 K05605 K00020 K01782 K01825 K07547,K07548 K12405 K15016 K00140,K00822 K00140,K13524 K00140,K07250 pos input hier amino acid degradation nonpolar, aliphatic amino acid degradation ref MetaCyc Pathway: valine degradation I Kegg M00036 Kegg Pathway Valine, leucine and isoleucine degradation - Reference pathway /// MF0042 asparagine degradation cpd [asparagine] [aspartate, NH3] K05597 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: L-asparagine degradation I /// MF0043 cysteine biosynthesis/homocysteine degradation cpd [serine, homocysteine] [cysteine, 2-oxobutanoate, NH3] K01697 K10150 K01758 pos input hier amino acid degradation polar, uncharged amino acid degradation ref Metacyc Pathway: cysteine biosynthesis/homocysteine degradation Kegg M00338 /// MF0044 cysteine degradation I cpd [cysteine] [NH3, H2S, pyruvate] K01758 K01760 K14155 pos input hier amino acid degradation polar, uncharged amino acid degradation ref Metacyc Pathway: L-cysteine degradation II /// MF0045 cysteine degradation II cpd [cysteine, 2-oxoglutarate, hydrogen cyanide] [pyruvate, glutamate, thiocyanate] K00812 K00813 K11358 K01011 pos input hier amino acid degradation polar, uncharged amino acid degradation ref Metacyc Pathway: L-cysteine degradation III /// MF0046 glutamine degradation I cpd [glutamine] [glutamate, NH3] K01425 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: glutamine degradation I /// MF0047 glutamine degradation II cpd [glutamine, 2-oxoglutarate] [glutamate] K00265,K00266 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: glutamine degradation II /// MF0048 serine degradation cpd [serine] [pyruvate, NH3] K01752 K01753 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: L-serine degradation /// MF0049 threonine degradation I cpd [threonine] [NH3, formate, propanoyl-CoA] K01754 K17989 K00656 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: L-threonine degradation I /// MF0050 threonine degradation II cpd [threonine] [glycine, acetyl-CoA] K00060,K00639 K01620,K00132 K01620,K04072 K01620,K04073 K01620,K18366 pos input hier amino acid degradation polar, uncharged amino acid degradation ref MetaCyc Pathway: L-threonine degradation IV MetaCyc Pathway: L-threonine degradation II /// MF0051 arginine degradation I cpd [arginine] [CO2, NH3, putrescine] cpd [arginine] [CO2, urea, putrescine] K01583 K01584 K01585 K02626 K01476,K01581 K10536,K12251 K01480 K01476,K01581 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) MetaCyc Pathway: L-arginine degradation III (arginine decarboxylase/agmatinase pathway) Kegg M00134 /// MF0052 arginine degradation II cpd [arginine, succinyl-CoA, 2-oxoglutarate] [CO2, NH3, glutamate, succinate] K00673 K01484 K00840 K06447 K05526 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-arginine degradation II (AST pathway) /// MF0053 arginine degradation III cpd [arginine, pyruvate] [alanine, CO2, 4-aminobutanoate, urea] K12252 K12253 K12254 K12255 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-arginine degradation IX (arginine:pyruvate transaminase pathway) /// MF0054 arginine degradation IV cpd [arginine, 2-oxoglutarate] [urea, glutamate] cpd [arginine, 2-oxoglutarate] [urea, glutamate, proline] cpd [arginine] [NH3, urea, proline] K01476 K00819,K00294 K00819,K13821 K00819,K00286 K01750 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-arginine degradation I (arginase pathway) MetaCyc Pathway: L-arginine degradation VI (arginase 2 pathway) MetaCyc Pathway: L-arginine degradation VII (arginase 3 pathway) /// MF0055 arginine degradation V cpd [arginine] [NH3,ornithine,CO2] K01478 K00611 K00926 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-arginine degradation V (arginine deiminase pathway) /// MF0056 histidine degradation cpd [histidine] [NH3, formate, glutamate] cpd [histidine] [NH3, formamide, glutamate] K01745 K01712 K01468 K01479 K05603,K01458 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-histidine degradation I MetaCyc Pathway: L-histidine degradation II Kegg M00045 /// MF0057 lysine degradation I cpd [lysine, acetyl-CoA] [NH3, butanoate, acetoacetyl-CoA] K01843 K01844,K18011 K18012 K00248 K18014 K01036 K01034,K01035 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-lysine fermentation to acetate and butanoate /// MF0058 lysine degradation II cpd [lysine] [CO2, cadaverine] K01582 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: L-lysine degradation I /// MF0059 anaerobic fatty acid beta-oxidation cpd [fatty acid] [acetyl-CoA] K06076 K12507 K06445 K01782 pos input hier lipid degradation beta-oxidation ref PMID:12535077 MetaCyc Pathway: fatty acid β-oxidation I /// MF0060 glycerol degradation I cpd [glycerol] [glyceraldehyde 3-phosphate] K00005 K00863 K01803 pos input hier lipid degradation glycerol degradation ref MetaCyc Pathway: glycerol degradation II /// MF0061 glycerol degradation II cpd [glycerol] [glyceraldehyde 3-phosphate] K00864 K00111,K00112,K00113 K01803 pos input hier lipid degradation glycerol degradation ref MetaCyc Pathway: glycerol degradation I /// MF0062 glycerol degradation III cpd [glycerol] [propane-1,3-diol] K06120,K06121,K06122 K00086 pos input hier lipid degradation glycerol degradation ref MetaCyc Pathway: glycerol degradation III /// MF0063 glyoxylate bypass cpd [acetyl-CoA] [CO2, phosphoenolpyruvate] K01647 K01681 K01682 K01637 K01638 K00024 pos central hier lipid degradation glyoxylate bypass ref MetaCyc Pathway: glyoxylate cycle Kegg M00012 /// MF0064 triacylglycerol degradation cpd [triacylglycerol] [glycerol, fatty acid] K01046 K01054 pos input hier lipid degradation triacylglycerol degradation ref MetaCyc Pathway: triacylglycerol degradation /// MF0065 Bifidobacterium shunt cpd [fructose 6-phosphate] [acetyl phosphate, glyceraldehyde 3-phosphate] K01621 K01632 K00616 K13810 K00615 K01807 K01808 K01783 K01621 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: Bifidobacterium shunt /// MF0066 Entner-Doudoroff pathway cpd [glucose-6-phosphate] [glyceraldehyde 3-phosphate, pyruvate] K00036 K01057 K07404 K01690 K01625 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: Entner-Doudoroff pathway I Kegg M00008 /// MF0067 glycolysis (preparatory phase) cpd [glucose] [glyceraldehyde 3-phosphate] K00844 K00845 K01810 K06859 K13810 K15916 K00850 K16370 K01622 K01623 K01624 K11645 K16305 K16306 K01803 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: glycolysis III (from glucose) Kegg M00001 /// MF0068 glycolysis (pay-off phase) cpd [glyceraldehyde 3-phosphate] [pyruvate] K00134 K00150 K00927 K01834 K01689 K00873 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: glycolysis III (from glucose) /// MF0069 NADH:ferredoxin oxidoreductase cpd [oxidized ferredoxin, NADH] [reduced ferredoxin, H+, NAD+] K00529 K15758 K15765 K18088 K18090 K18227 K18254 K18293 pos central hier gas metabolism hydrogen metabolism ref Kegg /// MF0070 pentose phosphate pathway (oxidative phase) cpd [glucose 6-phosphate] [CO2, ribulose 5-phosphate] K00036 K19243 K01057 K07404 K00033 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: pentose phosphate pathway (oxidative branch) /// MF0071 pentose phosphate pathway (non-oxidative branch) cpd [ribulose 5-phosphate] [glyceraldehyde 3-phosphate, fructose 6-phosphate] K01807 K01808 K01783 K00615 K00616 K13810 pos central hier central metabolism energy metabolism ref MetaCyc Pathway: pentose phosphate pathway (non-oxidative branch) /// MF0072 pyruvate dehydrogenase complex cpd [pyruvate] [CO2, acetyl-CoA] K00161,K00162,K00163 K00382 K00627 pos central hier central metabolism energy metabolism ref Kegg M00307 /// MF0073 pyruvate:ferredoxin oxidoreductase cpd [pyruvate, oxidized ferredoxin] [acetyl-CoA, CO2, reduced ferredoxin] K00169,K00170,K00171,K00172 K03737 pos central hier central metabolism energy metabolism ref Kegg M00307 /// MF0074 pyruvate:formate lyase cpd [pyruvate] [formate, acetyl-CoA] K00656 pos central hier central metabolism energy metabolism ref Kegg /// MF0075 acetate to acetyl-CoA cpd [acetate] [acetyl-CoA] K01895 K01905 pos input hier organic acid metabolism acetate metabolism ref MetaCyc Pathway: acetate conversion to acetyl-CoA Kegg Pathway Pyruvate metabolism /// MF0076 4-aminobutyrate degradation cpd [4-aminobutanoate, 2-oxoglutarate] [succinate, NAD(P)H, glutamate] cpd [4-aminobutanoate, acetyl-CoA, 2-oxoglutarate] [crotonyl-CoA, acetate, glutamate] K00823 K07250 K13524 K14268 K00043,K14534 K08318,K14534 K18120,K14534 K00135 K08324 pos input hier amino acid degradation positively charged amino acid degradation ref MetaCyc Pathway: 4-aminobutanoate degradation II MetaCyc Pathway: 4-aminobutanoate degradation III MetaCyc Pathway: 4-aminobutanoate degradation V /// MF0077 formate conversion cpd [formate] [CO2, H2] K00122 K00123,K00125,K00126 pos input hier organic acid metabolism formate metabolism ref MetaCyc Pathway: formate oxidation to CO2 /// MF0078 lactaldehyde degradation cpd [lactaldehyde] [propane-1,2-diol] K00048 pos input hier organic acid metabolism propionate metabolism ref MetaCyc Pathway: L-lactaldehyde degradation (anaerobic) /// MF0079 lactate consumption I cpd [lactate] [pyruvate] K00101 K00102 pos input hier organic acid metabolism lactate metabolism ref Kegg Pathway Pyruvate metabolism /// MF0080 lactate consumption II cpd [lactate] [propanoyl-CoA] K01026 K00249 pos input hier organic acid metabolism propionate metabolism ref MetaCyc Pathway: pyruvate fermentation to propanoate II (acrylate pathway) Kegg Pathway Propanoate metabolism /// MF0081 methanol conversion cpd [methanol] [methyl-CoM] K04480 K14080,K14081 pos input hier gas metabolism methanogenesis ref MetaCyc Pathway: methanogenesis from methanol Kegg M00356 /// MF0082 putrescine degradation cpd [putrescine] [4-aminobutanoate] K09251 K12256 K03343 K00137 pos input hier amines and polyamines degradation biogenic amine degradation ref MetaCyc Pathway: putrescine degradation I MetaCyc Pathway: putrescine degradation IV MetaCyc Pathway: putrescine degradation V /// MF0083 succinate consumption cpd [succinate, acetyl-CoA] [crotonyl-CoA, acetate] K18118 K15017 K15038 K18119 K00043 K08318 K18120 K18122 K14534 pos input hier organic acid metabolism butyrate metabolism ref MetaCyc Pathway: succinate fermentation to butanoate /// MF0084 succinate conversion to propionate cpd [succinate] [CO2, propionate] K11264 pos input hier organic acid metabolism succinate metabolism ref MetaCyc Pathway: conversion of succinate to propanoate /// MF0085 urea degradation cpd [urea] [CO2, NH3] K01941,K01457 K01428,K01429,K01430,K14048 K01427 pos input hier amines and polyamines degradation urea degradation ref MetaCyc Pathway: urea degradation I MetaCyc Pathway: urea degradation II /// MF0086 acetyl-CoA to acetate cpd [acetyl-CoA] [acetate] K00625,K00925 K13788,K00925 K15024,K00925 K01905 K01067 K18118 pos output hier organic acid metabolism acetate metabolism ref MetaCyc Pathway: acetate formation from acetyl-CoA MetaCyc Pathway: acetate formation from acetyl-CoA II MetaCyc Pathway: acetate formation from acetyl-CoA III (succinate) Kegg Pathway Pyruvate metabolism /// MF0087 acetyl-CoA to crotonyl-CoA cpd [ccetyl-CoA] [crotonyl-CoA] K00626 K00023 K01782 K01825 K07516 K07547,K07548 K12405 K15016 K01715 K01692 K01782 K01825 K13767 K15016 pos output hier organic acid metabolism butyrate metabolism ref MetaCyc Pathway: pyruvate fermentation to butanoate Kegg Pathway Butanoate metabolism /// MF0088 butyrate production I cpd [crotonyl-CoA] [butanoate] K00248 K00634 K00929 pos output hier organic acid metabolism butyrate metabolism ref MetaCyc Pathway: pyruvate fermentation to butanoate /// MF0089 butyrate production II cpd [crotonyl-CoA, acetate] [butanoate] K00248 K01034,K01035 K19709 pos output hier organic acid metabolism butyrate metabolism ref MetaCyc Pathway: acetyl-CoA fermentation to butanoate II /// MF0090 ethanol production I cpd [pyruvate] [formate, ethanol] K00656 K00132 K04072 K04073 K18366 K00001 K00121 K04072 K11440 K13953 K13954 pos output hier alcohol metabolism ethanol metabolism ref MetaCyc Pathway: pyruvate fermentation to ethanol I /// MF0091 ethanol production II cpd [pyruvate] [CO2, ethanol] K01568 K00001 K00121 K04072 K11440 K13953 K13954 pos output hier alcohol metabolism ethanol metabolism ref MetaCyc Pathway: pyruvate fermentation to ethanol II /// MF0092 lactate production cpd [pyruvate] [lactate] K00016 K03777 K03778 pos output hier organic acid metabolism lactate metabolism ref MetaCyc Pathway: pyruvate fermentation to lactate /// MF0093 propionate production I cpd [propanoyl-CoA] [propanoate] K13923 K00932 pos output hier organic acid metabolism propionate metabolism ref Kegg Pathway Propanoate metabolism /// MF0094 propionate production II cpd [propanoyl-CoA, acetate] [propanoate] K01026 pos output hier organic acid metabolism propionate metabolism ref MetaCyc Pathway: pyruvate fermentation to propanoate II (acrylate pathway) /// MF0095 propionate production III cpd [pyruvate, succinyl-CoA] [propanoyl-CoA, oxaloacetate] K01847 K01849,K01848 K11942 K05606 K03416,K17489,K17490 pos output hier organic acid metabolism propionate metabolism ref MetaCyc Pathway: pyruvate fermentation to propionate I /// MF0096 succinate production cpd [phosphoenolpyruvate, CO2] [succinate] K01596,K01595 K00024 K01676 K01677,K01678 K01679 K00239,K00240,K00241,K00242 pos output hier organic acid metabolism succinate metabolism ref MetaCyc Pathway: pyruvate fermentation to propanoate I Kegg M00149 /// MF0097 homoacetogenesis cpd [CO2, H2] [Acetyl-CoA] K05299,K15022 K01938 K01491 K00297 K15023 K00198 K14138,K00197,K00194 pos input hier gas metabolism acetogenesis ref MetaCyc Pathway: reductive acetyl coenzyme A pathway Kegg M00377 /// MF0098 hydrogen metabolism cpd [H+] [H2] K00532 K00533,K00534,K06441 K18016,K18017,K18023 K00436,K18005,K18006,K18007 pos output hier gas metabolism hydrogen metabolism ref Kegg /// MF0099 methanogenesis - methyl-coM cpd [methyl-CoM] [methane] K00399,K00401,K00402 pos output hier gas metabolism methanogenesis ref MetaCyc Pathway: methyl-coenzyme M reduction to methane /// MF0100 methanogenesis from carbon dioxide cpd [CO2, H2] [methyl-CoM] K00200,K00201,K00202,K00203,K11261 K00204 K00205 K11260 K00672 K01499 K00319 K13942 K00320 K00577,K00578,K00579,K00580,K00581,K00582,K00583,K00584 pos output hier gas metabolism methanogenesis ref MetaCyc Pathway: methanogenesis from H2 and CO2 Kegg M00567 /// MF0101 nitrate reduction (dissimilatory) cpd [nitrate] [NH3] K03385 pos output hier inorganic nutrient metabolism nitrogen ref MetaCyc Pathway: nitrate reduction IV (dissimilatory) /// MF0102 sulfate reduction (dissimilatory) cpd [sulfate, H2,] [hydrogen sulfide] K13811 K00958 K00955 K00957,K00956 K00394,K00395 K11180,K11181 pos output hier gas metabolism sulfate metabolism ref MetaCyc Pathway: sulfate reduction IV (dissimilatory) MetaCyc Pathway: sulfate reduction V (dissimilatory) Kegg M00176 /// MF0103 mucin degradation cpd [mucin] [NA] K01186 K05970 K01132 K01135 K01137 K01205 K01207 K12373 K14459 K01205 K01207 K12373 K01227 K13714 K01206 pos input hier glycoprotein degradation mucus degradation ref PMID:25852737 ///